Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 CICP8-201ENST00000455800 2813 ntBASIC17.16■□□□□ 0.34
UPF3BQ9BZI7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 AC020907.1-201ENST00000616460 1350 ntBASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 MIR497HG-202ENST00000572453 3838 ntBASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 MIR4741-201ENST00000579822 90 ntBASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 AC008687.7-202ENST00000637404 953 ntBASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 PPT1-213ENST00000641319 2388 ntBASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.15■□□□□ 0.34
UPF3BQ9BZI7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
UPF3BQ9BZI7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
UPF3BQ9BZI7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 BRWD1P1-201ENST00000401091 371 ntBASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 ST13P19-201ENST00000442505 1124 ntBASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 Z98259.2-201ENST00000641583 609 ntBASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UPF3BQ9BZI7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF3BQ9BZI7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms