Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HDHD3Q9BSH5 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 PIN1P1-201ENST00000412108 996 ntBASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 FAM8A4P-201ENST00000435433 1213 ntBASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 TP53TG3HP-202ENST00000569755 579 ntBASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HDHD3Q9BSH5 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HDHD3Q9BSH5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms