Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 COX5BP8-201ENST00000416911 349 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 COX20P2-201ENST00000452636 358 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 SLC25A47P1-201ENST00000531577 414 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 SORD2P-201ENST00000558556 1069 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC008735.3-201ENST00000596646 500 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC004466.1-201ENST00000599515 1080 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 ENPP7P14-201ENST00000621765 1040 ntBASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTN4IP1Q8WWV3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AL122018.1-201ENST00000446607 2310 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AL035633.1-201ENST00000406139 838 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 NME2P1-201ENST00000426182 414 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 KRT17P7-201ENST00000451704 1104 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 USP32P1-208ENST00000506594 1164 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AC103988.2-201ENST00000561804 725 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AC233724.13-201ENST00000598383 410 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AL022328.1-201ENST00000610050 478 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 IGHV3-72-202ENST00000621503 303 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 KHSRPP1-201ENST00000427983 1768 ntBASIC12.15□□□□□ -0.46
RTN4IP1Q8WWV3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
RTN4IP1Q8WWV3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
RTN4IP1Q8WWV3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RTN4IP1Q8WWV3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms