Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
STAG1Q8WVM7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 DUTP3-201ENST00000450025 415 ntBASIC16.79■□□□□ 0.28
STAG1Q8WVM7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC005740.1-201ENST00000515639 522 ntBASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.79■□□□□ 0.28
STAG1Q8WVM7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
STAG1Q8WVM7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 BX679664.3-201ENST00000414070 555 ntBASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AC073869.2-201ENST00000417338 1026 ntBASIC16.78■□□□□ 0.28
STAG1Q8WVM7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 FTLP1-201ENST00000449155 526 ntBASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AC113935.1-201ENST00000471722 555 ntBASIC16.78■□□□□ 0.28
STAG1Q8WVM7 RN7SL455P-201ENST00000580629 282 ntBASIC16.78■□□□□ 0.28
STAG1Q8WVM7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.78■□□□□ 0.28
STAG1Q8WVM7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.78■□□□□ 0.28
STAG1Q8WVM7 AC011474.4-201ENST00000623523 2076 ntBASIC16.77■□□□□ 0.28
STAG1Q8WVM7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
STAG1Q8WVM7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
STAG1Q8WVM7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
STAG1Q8WVM7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms