Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 RPL18AP3-201ENST00000462885 528 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 RN7SL81P-201ENST00000493781 261 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 ORAOV1P1-201ENST00000503108 395 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 MIR4649-201ENST00000582839 64 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC087392.5-201ENST00000612517 489 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AP001065.2-201ENST00000617205 644 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC025262.2-201ENST00000623975 1056 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC079416.2-201ENST00000625035 1193 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC005252.3-201ENST00000623855 2258 ntBASIC15.04■□□□□ -0
SHKBP1Q8TBC3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 AC090386.2-201ENST00000623010 1039 ntBASIC15.03■□□□□ -0
SHKBP1Q8TBC3 AC005618.3-201ENST00000624928 458 ntBASIC15.03■□□□□ -0
SHKBP1Q8TBC3 AP001184.1-201ENST00000637936 376 ntBASIC15.03■□□□□ -0
SHKBP1Q8TBC3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHKBP1Q8TBC3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHKBP1Q8TBC3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms