Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AL807761.2-201ENST00000422849 729 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AC019193.1-201ENST00000506678 823 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 PRKXP1-201ENST00000561423 1122 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AC138894.2-201ENST00000602838 371 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AL133467.4-201ENST00000602953 725 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AC051619.9-201ENST00000623237 597 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 GRK6P1-201ENST00000400595 1711 ntBASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ARHGEF39Q8N4T4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AL157996.1-201ENST00000624684 2299 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AL627231.1-201ENST00000394467 1125 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 EEF1DP6-201ENST00000449232 372 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 IGLV3-15-201ENST00000518356 244 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AC016629.1-201ENST00000596579 586 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AC007326.1-201ENST00000604539 458 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AL021707.6-201ENST00000609212 491 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 AC009145.4-201ENST00000625119 1294 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ARHGEF39Q8N4T4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms