Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 PRSS30P-206ENST00000641773 873 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 TUBB8P4-201ENST00000511806 1324 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 AC093525.8-201ENST00000624099 1342 ntBASIC12.86□□□□□ -0.35
LRRC28Q86X40 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRC28Q86X40 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRC28Q86X40 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AC092933.1-201ENST00000393644 945 ntBASIC12.85□□□□□ -0.35
LRRC28Q86X40 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 AL023775.1-201ENST00000454907 1746 ntBASIC12.85□□□□□ -0.35
LRRC28Q86X40 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRC28Q86X40 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRC28Q86X40 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRC28Q86X40 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms