Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC13.64□□□□□ -0.23
RIF1Q5UIP0 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 RN7SL479P-201ENST00000472003 300 ntBASIC13.64□□□□□ -0.23
RIF1Q5UIP0 AC112250.1-201ENST00000504640 745 ntBASIC13.64□□□□□ -0.23
RIF1Q5UIP0 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RIF1Q5UIP0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC106872.9-201ENST00000512437 1393 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 FTLP3-201ENST00000427242 528 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC138392.1-201ENST00000427577 921 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 HNRNPA1P3-201ENST00000440968 551 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 U3.5-201ENST00000363448 216 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 DNM1P46-202ENST00000415963 882 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.63□□□□□ -0.23
RIF1Q5UIP0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RIF1Q5UIP0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 KRT8P43-201ENST00000406052 1458 ntBASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 OR7E155P-201ENST00000412208 1014 ntBASIC13.62□□□□□ -0.23
RIF1Q5UIP0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms