Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 AC138035.3-201ENST00000622706 2791 ntBASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RSPO4Q2I0M5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 LILRP2-202ENST00000413572 1383 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 SHMT1P1-201ENST00000419974 1312 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ASS1P1-201ENST00000402854 1237 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC093106.1-201ENST00000437271 352 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 FAM86JP-202ENST00000484500 988 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ALG1L7P-201ENST00000502317 768 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC104640.1-201ENST00000562617 2109 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 DERL2-206ENST00000572834 589 ntTSL 3 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC112220.4-201ENST00000604982 1263 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 AC067931.2-201ENST00000623655 2003 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 RPL13AP3-202ENST00000494676 1473 ntBASIC13.74□□□□□ -0.21
RSPO4Q2I0M5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RSPO4Q2I0M5 AC011270.2-201ENST00000624293 2550 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms