Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.86□□□□□ -0.19
PCDH1Q08174 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PCDH1Q08174 POM121L10P-201ENST00000436994 1285 ntBASIC13.86□□□□□ -0.19
PCDH1Q08174 AK2P2-201ENST00000439142 405 ntBASIC13.86□□□□□ -0.19
PCDH1Q08174 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDH1Q08174 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 FAM86HP-204ENST00000513466 959 ntBASIC13.86□□□□□ -0.19
PCDH1Q08174 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDH1Q08174 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.86□□□□□ -0.19
PCDH1Q08174 AL583810.1-201ENST00000553344 1045 ntBASIC13.86□□□□□ -0.19
PCDH1Q08174 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDH1Q08174 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDH1Q08174 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PCDH1Q08174 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDH1Q08174 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
PCDH1Q08174 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PCDH1Q08174 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PCDH1Q08174 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 AL591846.1-201ENST00000451736 433 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PCDH1Q08174 RPL18P13-201ENST00000478088 569 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.85□□□□□ -0.19
PCDH1Q08174 SCARNA21-201ENST00000517026 139 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 AC005730.2-201ENST00000564549 1184 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 RN7SL560P-201ENST00000577943 264 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.85□□□□□ -0.19
PCDH1Q08174 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.85□□□□□ -0.19
PCDH1Q08174 AL008721.1-201ENST00000609964 604 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 AL096828.3-201ENST00000615354 462 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.85□□□□□ -0.19
PCDH1Q08174 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
PCDH1Q08174 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCDH1Q08174 PEG13-201ENST00000631594 5667 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PCDH1Q08174 TUBB1P2-201ENST00000422712 1306 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 TUBB1P1-201ENST00000503144 1300 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.85□□□□□ -0.19
PCDH1Q08174 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.85□□□□□ -0.19
PCDH1Q08174 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDH1Q08174 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms