Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 AC106872.9-201ENST00000512437 1393 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 KRT18P62-201ENST00000446618 1287 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 RN7SL460P-201ENST00000582806 258 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 AC069366.2-201ENST00000583643 430 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 AL136084.3-201ENST00000605631 439 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 AC147067.2-201ENST00000608161 289 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 KRT18P45-201ENST00000515347 1333 ntBASIC13.07□□□□□ -0.32
CACNA1BQ00975 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.07□□□□□ -0.32
CACNA1BQ00975 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CACNA1BQ00975 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC005011.1-201ENST00000455206 210 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC007992.1-201ENST00000513953 953 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AL009176.1-201ENST00000607876 650 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AL031577.1-201ENST00000339867 399 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC103724.2-201ENST00000520355 476 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC023051.2-201ENST00000541141 460 ntBASIC13.06□□□□□ -0.32
CACNA1BQ00975 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CACNA1BQ00975 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CACNA1BQ00975 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.05□□□□□ -0.32
CACNA1BQ00975 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CACNA1BQ00975 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms