Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SEC61A1P61619 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 AL139094.1-201ENST00000405549 1188 ntBASIC12.68□□□□□ -0.38
SEC61A1P61619 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
SEC61A1P61619 AC114812.1-204ENST00000449669 728 ntBASIC12.68□□□□□ -0.38
SEC61A1P61619 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 AC022447.6-201ENST00000515522 438 ntBASIC12.68□□□□□ -0.38
SEC61A1P61619 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 AC078819.1-201ENST00000547454 765 ntBASIC12.68□□□□□ -0.38
SEC61A1P61619 AC012085.1-201ENST00000548270 765 ntBASIC12.68□□□□□ -0.38
SEC61A1P61619 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.68□□□□□ -0.38
SEC61A1P61619 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.68□□□□□ -0.38
SEC61A1P61619 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.68□□□□□ -0.38
SEC61A1P61619 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 REXO1L6P-201ENST00000603433 1515 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AC090505.1-201ENST00000430515 1834 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC61A1P61619 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC61A1P61619 CNN2P8-201ENST00000421872 913 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 NUS1P3-201ENST00000423502 862 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC61A1P61619 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 ECM1P1-201ENST00000604092 1279 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AC138951.2-201ENST00000623455 1161 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 RHOXF1P1-202ENST00000635473 501 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 PRSS30P-206ENST00000641773 873 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SEC61A1P61619 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 MIR497HG-202ENST00000572453 3838 ntBASIC12.67□□□□□ -0.38
SEC61A1P61619 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC61A1P61619 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC61A1P61619 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms