Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.86■□□□□ 0.13
TM4SF4P48230 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC15.86■□□□□ 0.13
TM4SF4P48230 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC15.86■□□□□ 0.13
TM4SF4P48230 CETN3-205ENST00000522842 664 ntTSL 2 BASIC15.86■□□□□ 0.13
TM4SF4P48230 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC15.86■□□□□ 0.13
TM4SF4P48230 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC15.86■□□□□ 0.13
TM4SF4P48230 AC008622.3-201ENST00000621170 600 ntBASIC15.86■□□□□ 0.13
TM4SF4P48230 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.86■□□□□ 0.13
TM4SF4P48230 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM4SF4P48230 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM4SF4P48230 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.86■□□□□ 0.13
TM4SF4P48230 AC026271.1-201ENST00000447794 1348 ntBASIC15.86■□□□□ 0.13
TM4SF4P48230 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM4SF4P48230 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM4SF4P48230 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM4SF4P48230 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TM4SF4P48230 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TM4SF4P48230 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.86■□□□□ 0.13
TM4SF4P48230 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 AC011498.7-201ENST00000624986 2027 ntBASIC15.85■□□□□ 0.13
TM4SF4P48230 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM4SF4P48230 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC15.85■□□□□ 0.13
TM4SF4P48230 SNORA47-201ENST00000458862 138 ntBASIC15.85■□□□□ 0.13
TM4SF4P48230 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.85■□□□□ 0.13
TM4SF4P48230 RN7SL300P-201ENST00000582522 318 ntBASIC15.85■□□□□ 0.13
TM4SF4P48230 MIR5193-201ENST00000584510 109 ntBASIC15.85■□□□□ 0.13
TM4SF4P48230 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC15.85■□□□□ 0.13
TM4SF4P48230 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM4SF4P48230 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
TM4SF4P48230 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TM4SF4P48230 AC097474.1-201ENST00000506481 1371 ntBASIC15.85■□□□□ 0.13
TM4SF4P48230 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TM4SF4P48230 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.85■□□□□ 0.13
TM4SF4P48230 DOC2GP-204ENST00000639052 2548 ntBASIC15.85■□□□□ 0.13
TM4SF4P48230 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.84■□□□□ 0.13
TM4SF4P48230 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
TM4SF4P48230 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 AL513477.1-201ENST00000602865 2407 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 AL591499.1-201ENST00000307155 1153 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.84■□□□□ 0.13
TM4SF4P48230 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TM4SF4P48230 CA5BP1-205ENST00000435806 1064 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 HNRNPA1P3-201ENST00000440968 551 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 AP006248.1-201ENST00000610471 67 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 AC134878.2-201ENST00000620700 1265 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.84■□□□□ 0.13
TM4SF4P48230 AL031590.1-202ENST00000641466 1737 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.84■□□□□ 0.13
TM4SF4P48230 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TM4SF4P48230 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 AC011477.7-201ENST00000617163 1440 ntBASIC15.84■□□□□ 0.13
TM4SF4P48230 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.84■□□□□ 0.13
TM4SF4P48230 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TM4SF4P48230 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM4SF4P48230 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms