Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CD81-209ENST00000492627 886 ntTSL 3 BASIC19.26■□□□□ 0.67
ATF3P18847 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC19.26■□□□□ 0.67
ATF3P18847 RN7SL478P-201ENST00000584358 298 ntBASIC19.26■□□□□ 0.67
ATF3P18847 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC19.26■□□□□ 0.67
ATF3P18847 MIR6074-201ENST00000612054 107 ntBASIC19.26■□□□□ 0.67
ATF3P18847 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC19.26■□□□□ 0.67
ATF3P18847 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC19.26■□□□□ 0.67
ATF3P18847 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATF3P18847 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
ATF3P18847 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ATF3P18847 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC19.26■□□□□ 0.67
ATF3P18847 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF3P18847 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.25■□□□□ 0.67
ATF3P18847 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC19.25■□□□□ 0.67
ATF3P18847 PSME2P2-201ENST00000453033 700 ntBASIC19.25■□□□□ 0.67
ATF3P18847 MARK2P17-201ENST00000498560 841 ntBASIC19.25■□□□□ 0.67
ATF3P18847 AC093700.1-201ENST00000503348 717 ntBASIC19.25■□□□□ 0.67
ATF3P18847 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC19.25■□□□□ 0.67
ATF3P18847 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC19.25■□□□□ 0.67
ATF3P18847 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 AL590556.2-202ENST00000636906 844 ntBASIC19.25■□□□□ 0.67
ATF3P18847 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.25■□□□□ 0.67
ATF3P18847 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 AL590824.1-201ENST00000403828 1349 ntBASIC19.25■□□□□ 0.67
ATF3P18847 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF3P18847 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATF3P18847 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATF3P18847 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC19.24■□□□□ 0.67
ATF3P18847 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
ATF3P18847 AC064850.1-201ENST00000413279 1398 ntBASIC19.24■□□□□ 0.67
ATF3P18847 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ATF3P18847 KRT18P15-201ENST00000458108 1291 ntBASIC19.24■□□□□ 0.67
ATF3P18847 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC19.24■□□□□ 0.67
ATF3P18847 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.24■□□□□ 0.67
ATF3P18847 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.24■□□□□ 0.67
ATF3P18847 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC19.24■□□□□ 0.67
ATF3P18847 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC19.24■□□□□ 0.67
ATF3P18847 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC19.24■□□□□ 0.67
ATF3P18847 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATF3P18847 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATF3P18847 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF3P18847 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF3P18847 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF3P18847 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 PES1P2-201ENST00000449745 1735 ntBASIC19.23■□□□□ 0.67
ATF3P18847 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 AL118508.1-201ENST00000613502 2345 ntBASIC19.23■□□□□ 0.67
ATF3P18847 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATF3P18847 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms