Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC104982.3-201ENST00000581995 514 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC022748.3-201ENST00000621828 275 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AL365181.3-201ENST00000605886 3222 ntBASIC12.88□□□□□ -0.35
HLA-DOBP13765 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DOBP13765 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DOBP13765 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 FAM90A7P-201ENST00000382628 1395 ntBASIC12.87□□□□□ -0.35
HLA-DOBP13765 FAM90A23P-201ENST00000400136 1395 ntBASIC12.87□□□□□ -0.35
HLA-DOBP13765 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 PGAM1P5-201ENST00000548011 764 ntBASIC12.87□□□□□ -0.35
HLA-DOBP13765 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 BNIP3P13-201ENST00000599968 566 ntBASIC12.87□□□□□ -0.35
HLA-DOBP13765 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AC092299.1-201ENST00000632679 757 ntBASIC12.87□□□□□ -0.35
HLA-DOBP13765 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
HLA-DOBP13765 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 AL928654.5-201ENST00000624831 2501 ntBASIC12.87□□□□□ -0.35
HLA-DOBP13765 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DOBP13765 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DOBP13765 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms