Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 AC007274.2-201ENST00000421675 662 ntBASIC16.86■□□□□ 0.29
TOP1P11387 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 AC242376.1-201ENST00000559033 726 ntBASIC16.86■□□□□ 0.29
TOP1P11387 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 AL022334.2-201ENST00000610000 484 ntBASIC16.86■□□□□ 0.29
TOP1P11387 MIR6769A-201ENST00000617340 73 ntBASIC16.86■□□□□ 0.29
TOP1P11387 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TOP1P11387 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 AC152010.1-201ENST00000415779 2006 ntBASIC16.86■□□□□ 0.29
TOP1P11387 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP1P11387 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP1P11387 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TOP1P11387 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.85■□□□□ 0.29
TOP1P11387 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TOP1P11387 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TOP1P11387 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.85■□□□□ 0.29
TOP1P11387 ELK2AP-201ENST00000392510 1007 ntBASIC16.85■□□□□ 0.29
TOP1P11387 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TOP1P11387 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.85■□□□□ 0.29
TOP1P11387 RN7SL530P-201ENST00000485097 298 ntBASIC16.85■□□□□ 0.29
TOP1P11387 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.85■□□□□ 0.29
TOP1P11387 AC116345.2-201ENST00000512837 523 ntBASIC16.85■□□□□ 0.29
TOP1P11387 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.85■□□□□ 0.29
TOP1P11387 RTN3P1-201ENST00000536295 711 ntBASIC16.85■□□□□ 0.29
TOP1P11387 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 RHOQP1-201ENST00000555758 579 ntBASIC16.85■□□□□ 0.29
TOP1P11387 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.85■□□□□ 0.29
TOP1P11387 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 AC079336.7-201ENST00000623428 1078 ntBASIC16.85■□□□□ 0.29
TOP1P11387 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP1P11387 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.85■□□□□ 0.29
TOP1P11387 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TOP1P11387 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP1P11387 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
TOP1P11387 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 AC126335.2-201ENST00000623362 4637 ntBASIC16.84■□□□□ 0.29
TOP1P11387 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.84■□□□□ 0.29
TOP1P11387 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.84■□□□□ 0.29
TOP1P11387 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.84■□□□□ 0.29
TOP1P11387 RN7SL258P-201ENST00000478664 300 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms