Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM1P09493 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM1P09493 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.14
TPM1P09493 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TPM1P09493 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TPM1P09493 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM1P09493 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.89■□□□□ 0.13
TPM1P09493 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.89■□□□□ 0.13
TPM1P09493 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM1P09493 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 AC138466.3-201ENST00000619983 221 ntBASIC15.89■□□□□ 0.13
TPM1P09493 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TPM1P09493 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TPM1P09493 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM1P09493 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM1P09493 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 AC011481.3-201ENST00000623895 5594 ntBASIC15.88■□□□□ 0.13
TPM1P09493 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 AC009093.10-201ENST00000641956 1442 ntBASIC15.88■□□□□ 0.13
TPM1P09493 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 NCLP1-201ENST00000445357 1963 ntBASIC15.88■□□□□ 0.13
TPM1P09493 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TPM1P09493 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM1P09493 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.88■□□□□ 0.13
TPM1P09493 TMEM261P1-201ENST00000604899 340 ntBASIC15.88■□□□□ 0.13
TPM1P09493 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 AL022313.4-201ENST00000562756 2046 ntBASIC15.88■□□□□ 0.13
TPM1P09493 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM1P09493 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM1P09493 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM1P09493 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms