Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 CCT8L1P-201ENST00000465400 1674 ntBASIC13.25□□□□□ -0.29
THBS1P07996 AC144522.1-201ENST00000625111 1658 ntBASIC13.25□□□□□ -0.29
THBS1P07996 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.25□□□□□ -0.29
THBS1P07996 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.25□□□□□ -0.29
THBS1P07996 AC006122.1-201ENST00000493323 440 ntBASIC13.25□□□□□ -0.29
THBS1P07996 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC13.25□□□□□ -0.29
THBS1P07996 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 AC140658.4-201ENST00000561990 352 ntBASIC13.25□□□□□ -0.29
THBS1P07996 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.25□□□□□ -0.29
THBS1P07996 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.25□□□□□ -0.29
THBS1P07996 AL391001.1-201ENST00000602747 715 ntBASIC13.25□□□□□ -0.29
THBS1P07996 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
THBS1P07996 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
THBS1P07996 FAM90A12P-201ENST00000519497 2375 ntBASIC13.24□□□□□ -0.29
THBS1P07996 FAM90A24P-201ENST00000520792 2369 ntBASIC13.24□□□□□ -0.29
THBS1P07996 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.24□□□□□ -0.29
THBS1P07996 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 AC007952.5-201ENST00000572818 1486 ntBASIC13.24□□□□□ -0.29
THBS1P07996 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.24□□□□□ -0.29
THBS1P07996 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
THBS1P07996 AHCYP4-201ENST00000419201 1315 ntBASIC13.24□□□□□ -0.29
THBS1P07996 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
THBS1P07996 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
THBS1P07996 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
THBS1P07996 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 FAM8A2P-201ENST00000528813 1142 ntBASIC13.24□□□□□ -0.29
THBS1P07996 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.24□□□□□ -0.29
THBS1P07996 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.24□□□□□ -0.29
THBS1P07996 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.24□□□□□ -0.29
THBS1P07996 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.24□□□□□ -0.29
THBS1P07996 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms