Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.6□□□□□ -0.39
SFTPBP07988 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SFTPBP07988 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SFTPBP07988 AC105206.1-202ENST00000314927 2368 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 INE2-201ENST00000630399 1874 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 AC011840.2-201ENST00000563063 1520 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.59□□□□□ -0.39
SFTPBP07988 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.59□□□□□ -0.39
SFTPBP07988 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.59□□□□□ -0.39
SFTPBP07988 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 GCOM2-201ENST00000509133 1104 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.59□□□□□ -0.39
SFTPBP07988 AC244669.2-201ENST00000612320 853 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 Z82170.1-201ENST00000625081 3192 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 AC215219.1-201ENST00000400706 1817 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SFTPBP07988 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 CLUHP2-201ENST00000426660 1303 ntBASIC12.59□□□□□ -0.39
SFTPBP07988 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.59□□□□□ -0.39
SFTPBP07988 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SFTPBP07988 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SFTPBP07988 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.58□□□□□ -0.39
SFTPBP07988 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SFTPBP07988 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 POM121L8P-201ENST00000417732 1281 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 AC245100.3-201ENST00000441281 285 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 POM121L9P-203ENST00000441984 1285 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 AC007551.1-201ENST00000457394 519 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.58□□□□□ -0.4
SFTPBP07988 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.58□□□□□ -0.4
SFTPBP07988 AP005482.1-201ENST00000563722 1273 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 AC138696.2-201ENST00000607376 223 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 AC145423.3-201ENST00000615987 467 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 AC011498.7-201ENST00000624986 2027 ntBASIC12.58□□□□□ -0.4
SFTPBP07988 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.58□□□□□ -0.4
SFTPBP07988 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SFTPBP07988 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.58□□□□□ -0.4
SFTPBP07988 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms