Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.09□□□□□ -0.47
CD74P04233 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 AC008620.2-201ENST00000510294 1569 ntBASIC12.09□□□□□ -0.47
CD74P04233 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.09□□□□□ -0.47
CD74P04233 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CD74P04233 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CD74P04233 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.47
CD74P04233 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 RN7SKP175-201ENST00000408472 289 ntBASIC12.08□□□□□ -0.48
CD74P04233 MEP1AP4-201ENST00000423244 1087 ntBASIC12.08□□□□□ -0.48
CD74P04233 CNN2P11-201ENST00000429351 262 ntBASIC12.08□□□□□ -0.48
CD74P04233 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 AC241585.1-201ENST00000433527 519 ntBASIC12.08□□□□□ -0.48
CD74P04233 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.08□□□□□ -0.48
CD74P04233 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.08□□□□□ -0.48
CD74P04233 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CD74P04233 AC112482.1-201ENST00000492080 688 ntBASIC12.08□□□□□ -0.48
CD74P04233 FTLP10-202ENST00000505798 471 ntBASIC12.08□□□□□ -0.48
CD74P04233 KRT18P25-201ENST00000508931 1278 ntBASIC12.08□□□□□ -0.48
CD74P04233 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.08□□□□□ -0.48
CD74P04233 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 MIR3687-2-201ENST00000577708 61 ntBASIC12.08□□□□□ -0.48
CD74P04233 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.08□□□□□ -0.48
CD74P04233 AC004790.1-201ENST00000612686 536 ntBASIC12.08□□□□□ -0.48
CD74P04233 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 MIR3687-1-201ENST00000614492 61 ntBASIC12.08□□□□□ -0.48
CD74P04233 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.08□□□□□ -0.48
CD74P04233 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.08□□□□□ -0.48
CD74P04233 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CD74P04233 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CD74P04233 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 LINC00567-201ENST00000569854 3409 ntBASIC12.07□□□□□ -0.48
CD74P04233 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms