Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 MEX3B-202ENST00000558133 4333 ntBASIC13.97□□□□□ -0.17
KRT6AP02538 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
KRT6AP02538 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
KRT6AP02538 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT6AP02538 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT6AP02538 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.97□□□□□ -0.17
KRT6AP02538 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.97□□□□□ -0.17
KRT6AP02538 COX5BP8-201ENST00000416911 349 ntBASIC13.97□□□□□ -0.17
KRT6AP02538 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.97□□□□□ -0.17
KRT6AP02538 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.97□□□□□ -0.17
KRT6AP02538 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.97□□□□□ -0.17
KRT6AP02538 AC079316.1-201ENST00000548397 411 ntBASIC13.97□□□□□ -0.17
KRT6AP02538 DUX4L46-201ENST00000566845 751 ntBASIC13.97□□□□□ -0.17
KRT6AP02538 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 AC132192.2-201ENST00000596206 1147 ntBASIC13.97□□□□□ -0.17
KRT6AP02538 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KRT6AP02538 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT6AP02538 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT6AP02538 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT6AP02538 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT6AP02538 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT6AP02538 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 NME2P1-201ENST00000426182 414 ntBASIC13.96□□□□□ -0.17
KRT6AP02538 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 RPL7P3-201ENST00000441388 714 ntBASIC13.96□□□□□ -0.17
KRT6AP02538 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.96□□□□□ -0.17
KRT6AP02538 HIST2H2BB-201ENST00000449108 381 ntBASIC13.96□□□□□ -0.17
KRT6AP02538 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT6AP02538 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT6AP02538 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 AC023310.1-201ENST00000554836 735 ntBASIC13.96□□□□□ -0.17
KRT6AP02538 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.96□□□□□ -0.17
KRT6AP02538 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT6AP02538 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.96□□□□□ -0.17
KRT6AP02538 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT6AP02538 AC021016.3-201ENST00000608367 477 ntBASIC13.96□□□□□ -0.17
KRT6AP02538 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms