Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 STK25-235ENST00000543554 2556 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC6.15□□□□□ -1.42
USH2AO75445 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
USH2AO75445 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC6.15□□□□□ -1.42
USH2AO75445 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 SERPINB8P1-201ENST00000401898 377 ntBASIC6.15□□□□□ -1.42
USH2AO75445 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
USH2AO75445 CMC2-204ENST00000562713 573 ntTSL 3 BASIC6.15□□□□□ -1.42
USH2AO75445 CMC2-209ENST00000565108 399 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC6.15□□□□□ -1.42
USH2AO75445 AC132825.4-202ENST00000578792 434 ntBASIC6.15□□□□□ -1.42
USH2AO75445 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USH2AO75445 FURIN-208ENST00000640725 224 ntTSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 AC064850.1-201ENST00000413279 1398 ntBASIC6.15□□□□□ -1.42
USH2AO75445 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 MBL3P-201ENST00000402234 644 ntBASIC6.15□□□□□ -1.43
USH2AO75445 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 AKR1B1P3-201ENST00000525311 588 ntBASIC6.15□□□□□ -1.43
USH2AO75445 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC6.15□□□□□ -1.43
USH2AO75445 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC6.15□□□□□ -1.43
USH2AO75445 CLPP-204ENST00000596149 745 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC6.15□□□□□ -1.43
USH2AO75445 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 AC008622.3-201ENST00000621170 600 ntBASIC6.15□□□□□ -1.43
USH2AO75445 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC6.15□□□□□ -1.43
USH2AO75445 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
USH2AO75445 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 AP001775.1-201ENST00000532608 586 ntBASIC6.15□□□□□ -1.43
USH2AO75445 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC6.15□□□□□ -1.43
USH2AO75445 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC6.15□□□□□ -1.43
USH2AO75445 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC6.15□□□□□ -1.43
USH2AO75445 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC6.15□□□□□ -1.43
USH2AO75445 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 AC022382.1-201ENST00000602768 336 ntBASIC6.15□□□□□ -1.43
USH2AO75445 AZU1P1-201ENST00000603479 385 ntBASIC6.15□□□□□ -1.43
USH2AO75445 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 GSN-203ENST00000373808 2664 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 USP35-204ENST00000530267 2419 ntTSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 AMT-256ENST00000638063 1783 ntTSL 5 BASIC6.15□□□□□ -1.43
USH2AO75445 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
USH2AO75445 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
USH2AO75445 PES1P2-201ENST00000449745 1735 ntBASIC6.14□□□□□ -1.43
USH2AO75445 GSN-209ENST00000449733 2702 ntTSL 2 BASIC6.14□□□□□ -1.43
USH2AO75445 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
USH2AO75445 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USH2AO75445 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms