Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.76□□□□□ -0.53
SSSCA1O60232 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.76□□□□□ -0.53
SSSCA1O60232 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 AC004466.1-201ENST00000599515 1080 ntBASIC11.76□□□□□ -0.53
SSSCA1O60232 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSSCA1O60232 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SSSCA1O60232 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SSSCA1O60232 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.76□□□□□ -0.53
SSSCA1O60232 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSSCA1O60232 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.76□□□□□ -0.53
SSSCA1O60232 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 AL590440.2-201ENST00000641973 1595 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 AL355102.3-201ENST00000554299 1678 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.75□□□□□ -0.53
SSSCA1O60232 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SSSCA1O60232 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 RN7SKP230-201ENST00000365642 335 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 MIR574-201ENST00000385209 96 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.75□□□□□ -0.53
SSSCA1O60232 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.75□□□□□ -0.53
SSSCA1O60232 KRT18P13-201ENST00000400056 1290 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.75□□□□□ -0.53
SSSCA1O60232 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.75□□□□□ -0.53
SSSCA1O60232 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.75□□□□□ -0.53
SSSCA1O60232 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.75□□□□□ -0.53
SSSCA1O60232 RARRES2P5-201ENST00000564013 466 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 AC120045.2-201ENST00000567334 178 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 MIR3687-2-201ENST00000577708 61 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.75□□□□□ -0.53
SSSCA1O60232 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 SRD5A3P1-201ENST00000603021 949 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 MIR3687-1-201ENST00000614492 61 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 Z92544.3-201ENST00000624747 417 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 AL031719.1-201ENST00000623365 2587 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.75□□□□□ -0.53
SSSCA1O60232 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 AC024075.2-201ENST00000598112 1473 ntBASIC11.75□□□□□ -0.53
SSSCA1O60232 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.75□□□□□ -0.53
SSSCA1O60232 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SSSCA1O60232 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.75□□□□□ -0.53
SSSCA1O60232 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms