Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
EXTL3O43909 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
EXTL3O43909 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
EXTL3O43909 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.52■□□□□ 0.07
EXTL3O43909 AC011474.4-201ENST00000623523 2076 ntBASIC15.52■□□□□ 0.07
EXTL3O43909 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
EXTL3O43909 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
EXTL3O43909 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
EXTL3O43909 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
EXTL3O43909 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.51■□□□□ 0.07
EXTL3O43909 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
EXTL3O43909 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.51■□□□□ 0.07
EXTL3O43909 AC073150.1-201ENST00000450406 1084 ntBASIC15.51■□□□□ 0.07
EXTL3O43909 AC012618.1-201ENST00000461223 412 ntBASIC15.51■□□□□ 0.07
EXTL3O43909 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.51■□□□□ 0.07
EXTL3O43909 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.51■□□□□ 0.07
EXTL3O43909 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.51■□□□□ 0.07
EXTL3O43909 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.51■□□□□ 0.07
EXTL3O43909 KRT8P1-201ENST00000557533 1207 ntBASIC15.51■□□□□ 0.07
EXTL3O43909 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.51■□□□□ 0.07
EXTL3O43909 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 MIR6769A-201ENST00000617340 73 ntBASIC15.51■□□□□ 0.07
EXTL3O43909 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.51■□□□□ 0.07
EXTL3O43909 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.51■□□□□ 0.07
EXTL3O43909 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.51■□□□□ 0.07
EXTL3O43909 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
EXTL3O43909 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
EXTL3O43909 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.5■□□□□ 0.07
EXTL3O43909 OR8T1P-201ENST00000421347 918 ntBASIC15.5■□□□□ 0.07
EXTL3O43909 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.5■□□□□ 0.07
EXTL3O43909 GOLGA2P8-201ENST00000505201 779 ntBASIC15.5■□□□□ 0.07
EXTL3O43909 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.5■□□□□ 0.07
EXTL3O43909 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.5■□□□□ 0.07
EXTL3O43909 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.5■□□□□ 0.07
EXTL3O43909 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EXTL3O43909 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
EXTL3O43909 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.5■□□□□ 0.07
EXTL3O43909 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.49■□□□□ 0.07
EXTL3O43909 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
EXTL3O43909 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
EXTL3O43909 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
EXTL3O43909 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
EXTL3O43909 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
EXTL3O43909 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
EXTL3O43909 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.49■□□□□ 0.07
EXTL3O43909 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms