Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ACTBP14-201ENST00000411655 1089 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 AC133141.1-201ENST00000443015 339 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 AC004923.3-201ENST00000527532 355 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 AC113385.2-201ENST00000614465 762 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 AL450487.2-201ENST00000615934 407 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 AC245369.7-201ENST00000631386 350 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.13■□□□□ 0.33
ZC3H4Q9UPT8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AC117503.4-201ENST00000623229 1418 ntBASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AL359092.2-201ENST00000423330 585 ntBASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AP000533.1-201ENST00000456143 1177 ntBASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 RN7SL578P-201ENST00000477781 283 ntBASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 GRAMD4P6-201ENST00000556999 244 ntBASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AC016582.2-202ENST00000587765 1094 ntBASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZC3H4Q9UPT8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 AC020658.6-201ENST00000623564 1870 ntBASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 SAP18P2-201ENST00000434334 459 ntBASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms