Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AP000347.1-202ENST00000435868 847 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 FTLP10-202ENST00000505798 471 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 ENPP7P5-201ENST00000541031 1031 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AC092552.1-201ENST00000547243 906 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AC138466.3-201ENST00000619983 221 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AC009093.10-201ENST00000641956 1442 ntBASIC17.7■□□□□ 0.42
UPF2Q9HAU5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 KRT8P28-201ENST00000433288 1390 ntBASIC17.69■□□□□ 0.42
UPF2Q9HAU5 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 AK2P2-201ENST00000439142 405 ntBASIC17.69■□□□□ 0.42
UPF2Q9HAU5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 AP001063.1-201ENST00000568332 529 ntBASIC17.69■□□□□ 0.42
UPF2Q9HAU5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 MARK2P9-201ENST00000430958 1727 ntBASIC17.69■□□□□ 0.42
UPF2Q9HAU5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPF2Q9HAU5 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms