Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 SHMT1P1-201ENST00000419974 1312 ntBASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PHACTR1Q9C0D0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC019294.4-201ENST00000561777 2905 ntBASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AL355864.2-201ENST00000447420 863 ntBASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AL512310.5-201ENST00000551999 515 ntBASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 MIR4683-201ENST00000579659 81 ntBASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC073413.1-201ENST00000603927 732 ntBASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AC007952.5-201ENST00000572818 1486 ntBASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PHACTR1Q9C0D0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC010319.3-201ENST00000597028 470 ntBASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ZACNP1-201ENST00000612259 710 ntBASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC006453.4-201ENST00000636949 1252 ntBASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC061965.1-201ENST00000560524 1465 ntBASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.6□□□□□ -0.07
PHACTR1Q9C0D0 SHC1P1-201ENST00000425230 1745 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms