Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RN7SKP175-201ENST00000408472 289 ntBASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC012441.1-201ENST00000446669 685 ntBASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC233724.13-201ENST00000598383 410 ntBASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
AMBRA1Q9C0C7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AC005014.1-201ENST00000432006 2976 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AC005229.1-201ENST00000392885 409 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 BAATP1-201ENST00000412284 1225 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AL161932.2-201ENST00000435436 679 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 TDH-203ENST00000531764 1110 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AC027237.1-201ENST00000560942 655 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 BTNL10-201ENST00000595971 695 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AMBRA1Q9C0C7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 MARK2P9-201ENST00000430958 1727 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 AL138709.1-201ENST00000614840 1693 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms