Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 MIR193BHG-211ENST00000641433 5365 ntBASIC12.82□□□□□ -0.36
VRK1Q99986 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 AC079178.1-201ENST00000420915 656 ntBASIC12.82□□□□□ -0.36
VRK1Q99986 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.82□□□□□ -0.36
VRK1Q99986 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 AC006033.1-201ENST00000440505 426 ntBASIC12.82□□□□□ -0.36
VRK1Q99986 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.82□□□□□ -0.36
VRK1Q99986 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.82□□□□□ -0.36
VRK1Q99986 AC026434.2-201ENST00000506094 1078 ntBASIC12.82□□□□□ -0.36
VRK1Q99986 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.82□□□□□ -0.36
VRK1Q99986 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 MIR3615-201ENST00000581999 87 ntBASIC12.82□□□□□ -0.36
VRK1Q99986 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.82□□□□□ -0.36
VRK1Q99986 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 FKBP4P6-201ENST00000457486 1332 ntBASIC12.82□□□□□ -0.36
VRK1Q99986 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.82□□□□□ -0.36
VRK1Q99986 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.82□□□□□ -0.36
VRK1Q99986 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VRK1Q99986 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 STRCP1-201ENST00000509801 5328 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 AC130686.1-201ENST00000622936 2466 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.81□□□□□ -0.36
VRK1Q99986 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.81□□□□□ -0.36
VRK1Q99986 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 MIR1247-201ENST00000408206 136 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
VRK1Q99986 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.81□□□□□ -0.36
VRK1Q99986 GPAA1P2-201ENST00000417923 928 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 BCYRN1-201ENST00000418539 200 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.81□□□□□ -0.36
VRK1Q99986 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 AL591846.1-201ENST00000451736 433 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.81□□□□□ -0.36
VRK1Q99986 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.81□□□□□ -0.36
VRK1Q99986 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
VRK1Q99986 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.81□□□□□ -0.36
VRK1Q99986 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 DUX4L47-201ENST00000566374 394 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms