Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 OR5BD1P-201ENST00000532527 817 ntBASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 SORD2P-201ENST00000558556 1069 ntBASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 AC007250.1-201ENST00000608934 338 ntBASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SYNGAP1Q96PV0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 RN7SKP109-201ENST00000410592 316 ntBASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 BCAS2P2-201ENST00000425064 674 ntBASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNGAP1Q96PV0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYNGAP1Q96PV0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms