Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 FAM197Y7-201ENST00000432892 766 ntBASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 U91328.1-201ENST00000437528 223 ntBASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 ACTG1P3-201ENST00000431775 1114 ntBASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 FAM8A2P-201ENST00000528813 1142 ntBASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC025279.2-201ENST00000569730 653 ntBASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 C8orf49-201ENST00000525043 1968 ntBASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHAMP1Q96JM3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AC092658.1-201ENST00000505836 891 ntBASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AC104758.3-203ENST00000562938 2123 ntBASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.65■□□□□ 0.26
CHAMP1Q96JM3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms