Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 NUS1P3-201ENST00000423502 862 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC003958.1-201ENST00000435883 421 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AL662844.1-201ENST00000546340 181 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC105339.1-204ENST00000636249 355 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC104758.3-203ENST00000562938 2123 ntBASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC9.35□□□□□ -0.91
SMIM11BQ8TCY0 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AC090114.2-201ENST00000608477 7054 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms