Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 LINC01815-202ENST00000641468 1409 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 LINC00115-201ENST00000473798 1317 ntBASIC15.41■□□□□ 0.06
BEST2Q8NFU1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
BEST2Q8NFU1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 OR8T1P-201ENST00000421347 918 ntBASIC15.4■□□□□ 0.06
BEST2Q8NFU1 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 FTLP1-201ENST00000449155 526 ntBASIC15.4■□□□□ 0.06
BEST2Q8NFU1 ALG1L13P-202ENST00000519320 584 ntBASIC15.4■□□□□ 0.06
BEST2Q8NFU1 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.4■□□□□ 0.06
BEST2Q8NFU1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AL592076.1-201ENST00000424448 303 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AC019193.1-201ENST00000506678 823 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 MIR4706-201ENST00000582134 82 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AC007326.1-201ENST00000604539 458 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AC007718.1-201ENST00000621078 280 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AL353726.2-201ENST00000623259 884 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms