Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 RPSAP43-201ENST00000402237 625 ntBASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 HLA-J-203ENST00000494367 1087 ntBASIC12.47□□□□□ -0.41
BEST4Q8NFU0 AC026434.2-201ENST00000506094 1078 ntBASIC12.47□□□□□ -0.41
BEST4Q8NFU0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 Z92544.3-201ENST00000624747 417 ntBASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 AL021155.1-201ENST00000438808 2637 ntBASIC12.47□□□□□ -0.41
BEST4Q8NFU0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BEST4Q8NFU0 MKRN5P-201ENST00000445263 1467 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC003102.2-201ENST00000589195 1469 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 KRT18P13-201ENST00000400056 1290 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 KLF2P3-201ENST00000451977 1087 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 VDAC1P7-201ENST00000462417 847 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 RPL13AP25-201ENST00000484130 612 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC109322.1-201ENST00000524499 1264 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC140878.1-201ENST00000565277 250 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AL671883.3-201ENST00000603274 991 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AC027612.4-201ENST00000605371 583 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AL603764.1-201ENST00000636452 321 ntBASIC12.46□□□□□ -0.41
BEST4Q8NFU0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms