Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 AC008132.1-202ENST00000342005 1389 ntBASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 KRT8P21-201ENST00000430398 1491 ntBASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM48Q8IWZ4 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AC006335.1-201ENST00000445200 547 ntBASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AC012618.1-201ENST00000461223 412 ntBASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AL157813.1-201ENST00000612996 587 ntBASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 AC092299.1-201ENST00000632679 757 ntBASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 CICP20-201ENST00000443330 2801 ntBASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRIM48Q8IWZ4 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM48Q8IWZ4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms