Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.78□□□□□ -0.04
CDKL3Q8IVW4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 LINC02486-201ENST00000604157 3000 ntBASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDKL3Q8IVW4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AC079776.1-201ENST00000401540 1152 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 MIR1909-201ENST00000411312 80 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 SNX29P1-201ENST00000548357 1007 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AL591471.1-201ENST00000621855 229 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AC073548.1-201ENST00000624088 1882 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 CCT8L1P-201ENST00000465400 1674 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 AC144522.1-201ENST00000625111 1658 ntBASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDKL3Q8IVW4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 KRT18P15-201ENST00000458108 1291 ntBASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 AC003686.1-201ENST00000550956 1034 ntBASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 AL512310.5-201ENST00000551999 515 ntBASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms