Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AC138028.6-201ENST00000616106 1482 ntBASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 EIF4HP1-201ENST00000453115 687 ntBASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 SCARNA20.5-201ENST00000516991 142 ntBASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AC022217.1-201ENST00000521069 738 ntBASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AC138649.2-201ENST00000615886 705 ntBASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AC016700.1-201ENST00000429424 312 ntBASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AKR7A2P1-201ENST00000460134 915 ntBASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 RCC2P8-201ENST00000502779 1035 ntBASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AC084346.2-201ENST00000607097 949 ntBASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AL157813.1-201ENST00000612996 587 ntBASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD3Q7Z3D4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms