Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX3P78415 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX3P78415 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IRX3P78415 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IRX3P78415 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX3P78415 HIST2H2BA-201ENST00000412169 381 ntBASIC16.79■□□□□ 0.28
IRX3P78415 AC097065.1-201ENST00000425737 517 ntBASIC16.79■□□□□ 0.28
IRX3P78415 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.79■□□□□ 0.28
IRX3P78415 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 RN7SL277P-201ENST00000481521 288 ntBASIC16.79■□□□□ 0.28
IRX3P78415 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.79■□□□□ 0.28
IRX3P78415 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.79■□□□□ 0.28
IRX3P78415 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.79■□□□□ 0.28
IRX3P78415 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.79■□□□□ 0.28
IRX3P78415 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX3P78415 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IRX3P78415 AC022532.1-201ENST00000624563 1728 ntBASIC16.79■□□□□ 0.28
IRX3P78415 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
IRX3P78415 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.78■□□□□ 0.28
IRX3P78415 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.78■□□□□ 0.28
IRX3P78415 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.78■□□□□ 0.28
IRX3P78415 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.78■□□□□ 0.28
IRX3P78415 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.78■□□□□ 0.28
IRX3P78415 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.78■□□□□ 0.28
IRX3P78415 AL132780.4-201ENST00000624870 1135 ntBASIC16.78■□□□□ 0.28
IRX3P78415 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.78■□□□□ 0.28
IRX3P78415 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.78■□□□□ 0.28
IRX3P78415 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.78■□□□□ 0.28
IRX3P78415 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IRX3P78415 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IRX3P78415 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.78■□□□□ 0.28
IRX3P78415 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.77■□□□□ 0.28
IRX3P78415 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.77■□□□□ 0.28
IRX3P78415 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.77■□□□□ 0.28
IRX3P78415 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IRX3P78415 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 AC006504.5-208ENST00000588784 2401 ntBASIC16.77■□□□□ 0.28
IRX3P78415 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
IRX3P78415 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 ACE3P-201ENST00000423435 1973 ntBASIC16.77■□□□□ 0.28
IRX3P78415 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IRX3P78415 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.77■□□□□ 0.28
IRX3P78415 AC117489.1-201ENST00000625169 3217 ntBASIC16.77■□□□□ 0.28
IRX3P78415 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms