Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.81□□□□□ -0.36
GFRA1P56159 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.81□□□□□ -0.36
GFRA1P56159 AC132872.1-201ENST00000566986 1195 ntBASIC12.81□□□□□ -0.36
GFRA1P56159 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 AC103810.10-201ENST00000606504 343 ntBASIC12.81□□□□□ -0.36
GFRA1P56159 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.81□□□□□ -0.36
GFRA1P56159 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GFRA1P56159 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.81□□□□□ -0.36
GFRA1P56159 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GFRA1P56159 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 AC016397.2-201ENST00000624848 1985 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 AC006987.1-201ENST00000413610 527 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 BX679664.3-201ENST00000414070 555 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 HMGA1P1-201ENST00000415560 1062 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.8□□□□□ -0.36
GFRA1P56159 FTLP1-201ENST00000449155 526 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 AC113935.1-201ENST00000471722 555 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 CHCHD2P2-201ENST00000503744 321 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.8□□□□□ -0.36
GFRA1P56159 NDUFB10P1-201ENST00000567319 521 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.8□□□□□ -0.36
GFRA1P56159 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.8□□□□□ -0.36
GFRA1P56159 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 AC104581.4-201ENST00000623126 3052 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.8□□□□□ -0.36
GFRA1P56159 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.8□□□□□ -0.36
GFRA1P56159 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 CICP16-201ENST00000502609 2813 ntBASIC12.8□□□□□ -0.36
GFRA1P56159 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GFRA1P56159 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 MYO15B-237ENST00000642007 4893 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms