Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.96□□□□□ -0.17
PDX1P52945 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.96□□□□□ -0.17
PDX1P52945 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.96□□□□□ -0.17
PDX1P52945 DUTP3-201ENST00000450025 415 ntBASIC13.96□□□□□ -0.17
PDX1P52945 AC079112.1-201ENST00000454972 939 ntBASIC13.96□□□□□ -0.17
PDX1P52945 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.96□□□□□ -0.17
PDX1P52945 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 AC093752.3-201ENST00000567343 901 ntBASIC13.96□□□□□ -0.17
PDX1P52945 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.96□□□□□ -0.17
PDX1P52945 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.96□□□□□ -0.17
PDX1P52945 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
PDX1P52945 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PDX1P52945 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDX1P52945 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.18
PDX1P52945 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDX1P52945 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PDX1P52945 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDX1P52945 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.96□□□□□ -0.18
PDX1P52945 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDX1P52945 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
PDX1P52945 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
PDX1P52945 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.96□□□□□ -0.18
PDX1P52945 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PDX1P52945 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDX1P52945 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 MRPL37P1-201ENST00000592451 1337 ntBASIC13.95□□□□□ -0.18
PDX1P52945 KRT18P9-201ENST00000604826 1300 ntBASIC13.95□□□□□ -0.18
PDX1P52945 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AL807761.2-201ENST00000422849 729 ntBASIC13.95□□□□□ -0.18
PDX1P52945 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AL627422.1-201ENST00000434104 580 ntBASIC13.95□□□□□ -0.18
PDX1P52945 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.95□□□□□ -0.18
PDX1P52945 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 CHCHD2P9-201ENST00000461726 456 ntBASIC13.95□□□□□ -0.18
PDX1P52945 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.95□□□□□ -0.18
PDX1P52945 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 AL022334.2-201ENST00000610000 484 ntBASIC13.95□□□□□ -0.18
PDX1P52945 AC084781.1-201ENST00000613737 656 ntBASIC13.95□□□□□ -0.18
PDX1P52945 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 AC025262.2-201ENST00000623975 1056 ntBASIC13.95□□□□□ -0.18
PDX1P52945 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AC117489.1-201ENST00000625169 3217 ntBASIC13.95□□□□□ -0.18
PDX1P52945 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.95□□□□□ -0.18
PDX1P52945 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.95□□□□□ -0.18
PDX1P52945 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDX1P52945 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms