Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 API5-211ENST00000534695 560 ntTSL 5 BASIC12.71□□□□□ -0.37
CCR9P51686 PTP4A1P2-201ENST00000546033 454 ntBASIC12.71□□□□□ -0.37
CCR9P51686 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.71□□□□□ -0.37
CCR9P51686 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.71□□□□□ -0.37
CCR9P51686 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.71□□□□□ -0.37
CCR9P51686 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.71□□□□□ -0.37
CCR9P51686 AL033527.5-201ENST00000641382 801 ntBASIC12.71□□□□□ -0.37
CCR9P51686 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CCR9P51686 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.71□□□□□ -0.37
CCR9P51686 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.71□□□□□ -0.37
CCR9P51686 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCR9P51686 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCR9P51686 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.71□□□□□ -0.38
CCR9P51686 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CCR9P51686 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.71□□□□□ -0.38
CCR9P51686 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.71□□□□□ -0.38
CCR9P51686 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CCR9P51686 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCR9P51686 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
CCR9P51686 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCR9P51686 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.7□□□□□ -0.38
CCR9P51686 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CCR9P51686 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CCR9P51686 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CCR9P51686 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 AK2P2-201ENST00000439142 405 ntBASIC12.7□□□□□ -0.38
CCR9P51686 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 UGT1A2P-201ENST00000454886 866 ntBASIC12.7□□□□□ -0.38
CCR9P51686 RFPL4AP1-201ENST00000530883 850 ntBASIC12.7□□□□□ -0.38
CCR9P51686 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.7□□□□□ -0.38
CCR9P51686 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CCR9P51686 MARK2P9-201ENST00000430958 1727 ntBASIC12.7□□□□□ -0.38
CCR9P51686 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCR9P51686 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CCR9P51686 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.7□□□□□ -0.38
CCR9P51686 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCR9P51686 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.69□□□□□ -0.38
CCR9P51686 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.69□□□□□ -0.38
CCR9P51686 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CCR9P51686 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.69□□□□□ -0.38
CCR9P51686 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCR9P51686 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.69□□□□□ -0.38
CCR9P51686 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCR9P51686 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms