Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.69□□□□□ -0.38
CX3CR1P49238 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.69□□□□□ -0.38
CX3CR1P49238 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.69□□□□□ -0.38
CX3CR1P49238 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.69□□□□□ -0.38
CX3CR1P49238 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.69□□□□□ -0.38
CX3CR1P49238 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CX3CR1P49238 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC104506.1-201ENST00000609247 429 ntBASIC12.69□□□□□ -0.38
CX3CR1P49238 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 AC130686.1-201ENST00000622936 2466 ntBASIC12.69□□□□□ -0.38
CX3CR1P49238 AC111170.3-201ENST00000624282 2464 ntBASIC12.69□□□□□ -0.38
CX3CR1P49238 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 AL022313.4-201ENST00000562756 2046 ntBASIC12.69□□□□□ -0.38
CX3CR1P49238 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CX3CR1P49238 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CX3CR1P49238 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 USP17L6P-201ENST00000382470 1197 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 NME2P1-201ENST00000426182 414 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.68□□□□□ -0.38
CX3CR1P49238 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 CHMP1AP1-201ENST00000445563 662 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 HOMER2P2-201ENST00000451621 847 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.68□□□□□ -0.38
CX3CR1P49238 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.68□□□□□ -0.38
CX3CR1P49238 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 C2orf69P2-201ENST00000562032 1123 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 AP006547.1-201ENST00000563435 692 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.68□□□□□ -0.38
CX3CR1P49238 MIR3197-201ENST00000582241 73 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.68□□□□□ -0.38
CX3CR1P49238 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 FP325330.2-201ENST00000624219 5630 ntBASIC12.68□□□□□ -0.38
CX3CR1P49238 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms