Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 POM121L10P-201ENST00000436994 1285 ntBASIC12.82□□□□□ -0.36
CSNK1A1P48729 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC007663.3-201ENST00000609632 465 ntBASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC091271.1-201ENST00000611877 1162 ntBASIC12.82□□□□□ -0.36
CSNK1A1P48729 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSNK1A1P48729 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSNK1A1P48729 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 KRT8P24-201ENST00000560290 1559 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC011474.4-201ENST00000623523 2076 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 BRWD1P1-201ENST00000401091 371 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 RPS2P32-201ENST00000439199 892 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 RPL18P13-201ENST00000478088 569 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AL008721.1-201ENST00000609964 604 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC005695.3-201ENST00000614522 232 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AL591471.1-201ENST00000621855 229 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.81□□□□□ -0.36
CSNK1A1P48729 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms