Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
MMP13P45452 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.98□□□□□ -0.01
MMP13P45452 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP13P45452 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
MMP13P45452 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.98□□□□□ -0.01
MMP13P45452 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.98□□□□□ -0.01
MMP13P45452 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.98□□□□□ -0.01
MMP13P45452 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP13P45452 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.98□□□□□ -0.01
MMP13P45452 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.98□□□□□ -0.01
MMP13P45452 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 AL359881.2-201ENST00000602973 570 ntBASIC14.98□□□□□ -0.01
MMP13P45452 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
MMP13P45452 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 KRT8P28-201ENST00000433288 1390 ntBASIC14.98□□□□□ -0.01
MMP13P45452 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
MMP13P45452 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.98□□□□□ -0.01
MMP13P45452 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
MMP13P45452 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 NCLP1-201ENST00000445357 1963 ntBASIC14.97□□□□□ -0.01
MMP13P45452 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.97□□□□□ -0.01
MMP13P45452 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.97□□□□□ -0.01
MMP13P45452 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
MMP13P45452 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.97□□□□□ -0.01
MMP13P45452 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.97□□□□□ -0.01
MMP13P45452 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.97□□□□□ -0.01
MMP13P45452 DUX4L46-201ENST00000566845 751 ntBASIC14.97□□□□□ -0.01
MMP13P45452 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.97□□□□□ -0.01
MMP13P45452 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.97□□□□□ -0.01
MMP13P45452 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.97□□□□□ -0.01
MMP13P45452 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 E2F3P2-201ENST00000447755 1422 ntBASIC14.97□□□□□ -0.01
MMP13P45452 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MMP13P45452 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.97□□□□□ -0.01
MMP13P45452 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.97□□□□□ -0.01
MMP13P45452 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MMP13P45452 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MMP13P45452 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MMP13P45452 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.96□□□□□ -0.01
MMP13P45452 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MMP13P45452 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.96□□□□□ -0.01
MMP13P45452 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
MMP13P45452 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms