Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SSR1P43307 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SSR1P43307 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 AP000593.2-201ENST00000542775 1433 ntBASIC15.42■□□□□ 0.06
SSR1P43307 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSR1P43307 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.41■□□□□ 0.06
SSR1P43307 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.41■□□□□ 0.06
SSR1P43307 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SSR1P43307 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SSR1P43307 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SSR1P43307 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.41■□□□□ 0.06
SSR1P43307 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SSR1P43307 AC092933.1-201ENST00000393644 945 ntBASIC15.41■□□□□ 0.06
SSR1P43307 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 USP32P1-208ENST00000506594 1164 ntBASIC15.41■□□□□ 0.06
SSR1P43307 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.41■□□□□ 0.06
SSR1P43307 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 AL596325.1-201ENST00000563991 1082 ntBASIC15.41■□□□□ 0.06
SSR1P43307 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SSR1P43307 MIR4683-201ENST00000579659 81 ntBASIC15.41■□□□□ 0.06
SSR1P43307 BTNL10-201ENST00000595971 695 ntBASIC15.41■□□□□ 0.06
SSR1P43307 BX088702.1-201ENST00000610784 235 ntBASIC15.41■□□□□ 0.06
SSR1P43307 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SSR1P43307 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.41■□□□□ 0.06
SSR1P43307 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SSR1P43307 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 KHSRPP1-201ENST00000427983 1768 ntBASIC15.41■□□□□ 0.06
SSR1P43307 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 CICP17-201ENST00000418553 2377 ntBASIC15.41■□□□□ 0.06
SSR1P43307 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSR1P43307 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 AOC4P-203ENST00000566825 2289 ntBASIC15.4■□□□□ 0.06
SSR1P43307 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 AC099521.3-201ENST00000624251 2938 ntBASIC15.4■□□□□ 0.06
SSR1P43307 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
SSR1P43307 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.4■□□□□ 0.06
SSR1P43307 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.4■□□□□ 0.06
SSR1P43307 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.4■□□□□ 0.06
SSR1P43307 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.4■□□□□ 0.06
SSR1P43307 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 AP001002.3-201ENST00000623482 206 ntBASIC15.4■□□□□ 0.06
SSR1P43307 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 AL358472.5-202ENST00000641448 1267 ntBASIC15.4■□□□□ 0.06
SSR1P43307 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 AL359881.3-201ENST00000602640 1721 ntBASIC15.4■□□□□ 0.06
SSR1P43307 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SSR1P43307 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SSR1P43307 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSR1P43307 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC15.39■□□□□ 0.05
SSR1P43307 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSR1P43307 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SSR1P43307 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms