Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC005324.6-201ENST00000587972 613 ntBASIC15.17■□□□□ 0.02
RFC1P35251 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.17■□□□□ 0.02
RFC1P35251 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.17■□□□□ 0.02
RFC1P35251 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.17■□□□□ 0.02
RFC1P35251 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.17■□□□□ 0.02
RFC1P35251 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFC1P35251 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
RFC1P35251 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
RFC1P35251 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 PEG13-201ENST00000631594 5667 ntBASIC15.17■□□□□ 0.02
RFC1P35251 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
RFC1P35251 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.16■□□□□ 0.02
RFC1P35251 LAP3P2-201ENST00000454686 1454 ntBASIC15.16■□□□□ 0.02
RFC1P35251 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.16■□□□□ 0.02
RFC1P35251 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 MIR663B-201ENST00000408361 115 ntBASIC15.16■□□□□ 0.02
RFC1P35251 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.16■□□□□ 0.02
RFC1P35251 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.16■□□□□ 0.02
RFC1P35251 RPL18P13-201ENST00000478088 569 ntBASIC15.16■□□□□ 0.02
RFC1P35251 AC021723.1-201ENST00000486306 515 ntBASIC15.16■□□□□ 0.02
RFC1P35251 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.16■□□□□ 0.02
RFC1P35251 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.16■□□□□ 0.02
RFC1P35251 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.16■□□□□ 0.02
RFC1P35251 AC124068.2-201ENST00000569473 1109 ntBASIC15.16■□□□□ 0.02
RFC1P35251 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.16■□□□□ 0.02
RFC1P35251 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RFC1P35251 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFC1P35251 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RFC1P35251 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 AGAP10P-201ENST00000454844 2418 ntBASIC15.15■□□□□ 0.02
RFC1P35251 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 KRT8P29-201ENST00000420409 1371 ntBASIC15.15■□□□□ 0.02
RFC1P35251 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RFC1P35251 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.15■□□□□ 0.02
RFC1P35251 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RFC1P35251 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 VDAC1P1-201ENST00000439229 848 ntBASIC15.15■□□□□ 0.02
RFC1P35251 TUBB8P8-201ENST00000458717 1058 ntBASIC15.15■□□□□ 0.02
RFC1P35251 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.15■□□□□ 0.02
RFC1P35251 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 SCARNA21-201ENST00000517026 139 ntBASIC15.15■□□□□ 0.02
RFC1P35251 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms