Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 MIR4783-201ENST00000580343 82 ntBASIC14.2□□□□□ -0.14
CDH3P22223 RN7SL163P-201ENST00000583100 276 ntBASIC14.2□□□□□ -0.14
CDH3P22223 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH3P22223 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.2□□□□□ -0.14
CDH3P22223 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 AC138649.2-201ENST00000615886 705 ntBASIC14.2□□□□□ -0.14
CDH3P22223 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDH3P22223 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 AC004899.1-201ENST00000424687 1714 ntBASIC14.2□□□□□ -0.14
CDH3P22223 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH3P22223 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 NUTM2HP-201ENST00000442076 2498 ntBASIC14.2□□□□□ -0.14
CDH3P22223 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH3P22223 INTS4P1-203ENST00000641008 3683 ntBASIC14.2□□□□□ -0.14
CDH3P22223 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 AC244394.1-201ENST00000435000 1665 ntBASIC14.2□□□□□ -0.14
CDH3P22223 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH3P22223 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 AC018442.1-201ENST00000421439 2061 ntBASIC14.19□□□□□ -0.14
CDH3P22223 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 BCYRN1-201ENST00000418539 200 ntBASIC14.19□□□□□ -0.14
CDH3P22223 FNTAP2-201ENST00000430308 634 ntBASIC14.19□□□□□ -0.14
CDH3P22223 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH3P22223 AC012441.2-201ENST00000444843 739 ntBASIC14.19□□□□□ -0.14
CDH3P22223 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH3P22223 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CDH3P22223 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 BNIP3P13-201ENST00000599968 566 ntBASIC14.19□□□□□ -0.14
CDH3P22223 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.19□□□□□ -0.14
CDH3P22223 AC009884.2-201ENST00000603110 324 ntBASIC14.19□□□□□ -0.14
CDH3P22223 AL136295.7-201ENST00000619226 1200 ntBASIC14.19□□□□□ -0.14
CDH3P22223 AC004923.1-202ENST00000642106 209 ntBASIC14.19□□□□□ -0.14
CDH3P22223 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH3P22223 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH3P22223 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 DMBT1P1-203ENST00000636837 4628 ntBASIC14.19□□□□□ -0.14
CDH3P22223 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH3P22223 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
CDH3P22223 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 AL008718.2-201ENST00000609206 1313 ntBASIC14.18□□□□□ -0.14
CDH3P22223 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms