Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB4AP20338 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB4AP20338 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RAB4AP20338 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
RAB4AP20338 MIR346-201ENST00000362234 95 ntBASIC11.07□□□□□ -0.64
RAB4AP20338 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.07□□□□□ -0.64
RAB4AP20338 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 RNA5SP415-201ENST00000517246 115 ntBASIC11.07□□□□□ -0.64
RAB4AP20338 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB4AP20338 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.07□□□□□ -0.64
RAB4AP20338 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB4AP20338 AC018845.2-201ENST00000568326 409 ntBASIC11.07□□□□□ -0.64
RAB4AP20338 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.07□□□□□ -0.64
RAB4AP20338 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 Z98257.2-202ENST00000641138 1548 ntBASIC11.07□□□□□ -0.64
RAB4AP20338 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RAB4AP20338 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
RAB4AP20338 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RAB4AP20338 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB4AP20338 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB4AP20338 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms