Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN1P18031 KRT8P19-201ENST00000551916 1455 ntBASIC15.17■□□□□ 0.02
PTPN1P18031 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PTPN1P18031 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN1P18031 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN1P18031 RN7SL67P-201ENST00000492147 296 ntBASIC15.17■□□□□ 0.02
PTPN1P18031 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PTPN1P18031 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN1P18031 MIR3907-201ENST00000579424 151 ntBASIC15.17■□□□□ 0.02
PTPN1P18031 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN1P18031 CICP16-201ENST00000502609 2813 ntBASIC15.17■□□□□ 0.02
PTPN1P18031 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PTPN1P18031 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN1P18031 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN1P18031 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.17■□□□□ 0.02
PTPN1P18031 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN1P18031 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN1P18031 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.17■□□□□ 0.02
PTPN1P18031 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN1P18031 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN1P18031 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PTPN1P18031 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN1P18031 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN1P18031 AC234782.1-201ENST00000451950 919 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 CEP164P1-201ENST00000455142 418 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 KRT18P15-201ENST00000458108 1291 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.16■□□□□ 0.02
PTPN1P18031 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN1P18031 IGLV3-15-201ENST00000518356 244 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 ALG1L13P-202ENST00000519320 584 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 AC007718.1-201ENST00000621078 280 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN1P18031 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PTPN1P18031 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 KRT8P31-201ENST00000504812 1408 ntBASIC15.16■□□□□ 0.02
PTPN1P18031 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN1P18031 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PTPN1P18031 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PTPN1P18031 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN1P18031 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN1P18031 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN1P18031 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN1P18031 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN1P18031 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN1P18031 CAP2P1-201ENST00000557743 1390 ntBASIC15.15■□□□□ 0.02
PTPN1P18031 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN1P18031 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN1P18031 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN1P18031 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms