Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.35□□□□□ -0.11
VCANP13611 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VCANP13611 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.35□□□□□ -0.11
VCANP13611 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.35□□□□□ -0.11
VCANP13611 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 U3.5-201ENST00000363448 216 ntBASIC14.35□□□□□ -0.11
VCANP13611 AC010086.2-201ENST00000428616 226 ntBASIC14.35□□□□□ -0.11
VCANP13611 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.35□□□□□ -0.11
VCANP13611 AC012066.1-201ENST00000439252 694 ntBASIC14.35□□□□□ -0.11
VCANP13611 AC008267.3-201ENST00000448776 712 ntBASIC14.35□□□□□ -0.11
VCANP13611 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.35□□□□□ -0.11
VCANP13611 AC010442.2-201ENST00000509301 407 ntBASIC14.35□□□□□ -0.11
VCANP13611 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC14.35□□□□□ -0.11
VCANP13611 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VCANP13611 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.35□□□□□ -0.11
VCANP13611 AC117489.1-201ENST00000625169 3217 ntBASIC14.35□□□□□ -0.11
VCANP13611 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.35□□□□□ -0.11
VCANP13611 DLX4-206ENST00000611342 1662 ntBASIC14.35□□□□□ -0.11
VCANP13611 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCANP13611 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 AC092135.3-201ENST00000624151 1846 ntBASIC14.34□□□□□ -0.11
VCANP13611 KRT18P42-201ENST00000505048 1255 ntBASIC14.34□□□□□ -0.11
VCANP13611 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 AL031058.1-201ENST00000561592 888 ntBASIC14.34□□□□□ -0.11
VCANP13611 RN7SL827P-201ENST00000607480 288 ntBASIC14.34□□□□□ -0.11
VCANP13611 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 TUBB8P9-201ENST00000422534 1276 ntBASIC14.34□□□□□ -0.11
VCANP13611 TUBB8P10-201ENST00000430210 1279 ntBASIC14.34□□□□□ -0.11
VCANP13611 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC14.34□□□□□ -0.11
VCANP13611 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 AC104581.4-201ENST00000623126 3052 ntBASIC14.34□□□□□ -0.11
VCANP13611 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.34□□□□□ -0.11
VCANP13611 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.34□□□□□ -0.11
VCANP13611 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 AC073347.1-201ENST00000421633 2643 ntBASIC14.34□□□□□ -0.11
VCANP13611 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.34□□□□□ -0.11
VCANP13611 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCANP13611 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.34□□□□□ -0.11
VCANP13611 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VCANP13611 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC14.33□□□□□ -0.11
VCANP13611 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.33□□□□□ -0.11
VCANP13611 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
VCANP13611 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VCANP13611 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.33□□□□□ -0.11
VCANP13611 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VCANP13611 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VCANP13611 ASLP1-201ENST00000428790 637 ntBASIC14.33□□□□□ -0.11
VCANP13611 BICD1P1-201ENST00000457832 1222 ntBASIC14.33□□□□□ -0.11
VCANP13611 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCANP13611 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.33□□□□□ -0.12
VCANP13611 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VCANP13611 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCANP13611 AC013268.4-201ENST00000637413 2228 ntBASIC14.33□□□□□ -0.12
VCANP13611 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VCANP13611 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCANP13611 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms